STRINGSTRING
SAS1 protein (Phaeodactylum tricornutum) - STRING interaction network
"SAS1" - Regulator of chromatin silencing in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SAS1Regulator of chromatin silencing (624 aa)    
Predicted Functional Partners:
Phatr46994
Predicted protein (730 aa)
     
  0.997
Phatr46837
Predicted protein (997 aa)
     
 
  0.973
BMS1
Ribosome biogenesis protein BMS1 (1096 aa)
     
 
  0.971
Phatr14145
Predicted protein (516 aa)
     
 
  0.970
Phatr51897
Predicted protein (531 aa)
     
   
  0.958
Phatr32758
Predicted protein (483 aa)
     
 
    0.958
Phatr30585
Predicted protein (942 aa)
     
 
    0.958
Phatr8777
Predicted protein (110 aa)
     
        0.958
Phatr44555
Predicted protein (743 aa)
     
        0.958
Phatr36927
Predicted protein (409 aa)
     
        0.958
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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