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STRINGSTRING
Phatr54049 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr54049" - Acetyl-coa transporter in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr54049Acetyl-coa transporter (646 aa)    
Predicted Functional Partners:
Phatr15472
Predicted protein (201 aa)
     
   
  0.670
Phatr31650
Solute carrier (590 aa)
     
   
  0.669
Phatr27039
Predicted protein (634 aa)
     
        0.596
Sec61alpha
Transport protein Sec61 alpha subunit; Belongs to the SecY/SEC61-alpha family (472 aa)
     
   
  0.583
Phatr48220
Predicted protein (1041 aa)
     
        0.565
Phatr47099
Predicted protein (324 aa)
     
        0.560
Phatr51040
Predicted protein (607 aa)
       
      0.554
Phatr45250
Predicted protein (743 aa)
     
   
  0.550
Phatr28833
Predicted protein (464 aa)
     
 
  0.542
hHrd1
Predicted protein (632 aa)
     
        0.518
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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