Phatr54049 protein (Phaeodactylum tricornutum)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
some 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

Your Input:

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Score

Phatr54049

Acetyl-coa transporter (646 aa)

Predicted Functional Partners:

Phatr15472

0.670

Phatr31650

0.669

Phatr27039

0.596

Sec61alpha

0.583

Phatr48220

0.565

Phatr47099

0.560

Phatr51040

0.554

Phatr45250

0.550

Phatr28833

0.542

hHrd1

0.518

Your Current Organism:

Phaeodactylum tricornutum

NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum

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structured XML interaction data, according to the 'PSI-MI' data standard

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Phatr15472	Phatr27039	Phatr15472	Phatr27039	Predicted protein	Predicted protein	0.898
Phatr15472	Phatr45250	Phatr15472	Phatr45250	Predicted protein	Predicted protein	0.401
Phatr15472	Phatr54049	Phatr15472	Phatr54049	Predicted protein	Acetyl-coa transporter	0.670
Phatr15472	Sec61alpha	Phatr15472	Phatr41031	Predicted protein	Transport protein Sec61 alpha subunit; Belongs to the SecY/SEC61-alpha family	0.503
Phatr27039	Phatr15472	Phatr27039	Phatr15472	Predicted protein	Predicted protein	0.898
Phatr27039	Phatr28833	Phatr27039	Phatr28833	Predicted protein	Predicted protein	0.407
Phatr27039	Phatr47099	Phatr27039	Phatr47099	Predicted protein	Predicted protein	0.999
Phatr27039	Phatr48220	Phatr27039	Phatr48220	Predicted protein	Predicted protein	0.746
Phatr27039	Phatr54049	Phatr27039	Phatr54049	Predicted protein	Acetyl-coa transporter	0.596
Phatr27039	Sec61alpha	Phatr27039	Phatr41031	Predicted protein	Transport protein Sec61 alpha subunit; Belongs to the SecY/SEC61-alpha family	0.991
Phatr27039	hHrd1	Phatr27039	Phatr49801	Predicted protein	Predicted protein	0.450
Phatr28833	Phatr27039	Phatr28833	Phatr27039	Predicted protein	Predicted protein	0.407
Phatr28833	Phatr54049	Phatr28833	Phatr54049	Predicted protein	Acetyl-coa transporter	0.542
Phatr28833	Sec61alpha	Phatr28833	Phatr41031	Predicted protein	Transport protein Sec61 alpha subunit; Belongs to the SecY/SEC61-alpha family	0.427
Phatr31650	Phatr54049	Phatr31650	Phatr54049	Solute carrier	Acetyl-coa transporter	0.669
Phatr45250	Phatr15472	Phatr45250	Phatr15472	Predicted protein	Predicted protein	0.401
Phatr45250	Phatr54049	Phatr45250	Phatr54049	Predicted protein	Acetyl-coa transporter	0.550
Phatr47099	Phatr27039	Phatr47099	Phatr27039	Predicted protein	Predicted protein	0.999
Phatr47099	Phatr54049	Phatr47099	Phatr54049	Predicted protein	Acetyl-coa transporter	0.560
Phatr47099	Sec61alpha	Phatr47099	Phatr41031	Predicted protein	Transport protein Sec61 alpha subunit; Belongs to the SecY/SEC61-alpha family	0.952

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