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Lhcx2 protein (Phaeodactylum tricornutum) - STRING interaction network
"Lhcx2" - Protein fucoxanthin chlorophyll a/c protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lhcx2Protein fucoxanthin chlorophyll a/c protein (203 aa)    
Predicted Functional Partners:
atpB
ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane (501 aa)
           
  0.455
CPF2
Cry-dash from the cryptochrome/photolyase family (610 aa)
           
  0.455
Lhcf12
Protein fucoxanthin chlorophyll protein (193 aa)
           
  0.455
CPF1
Cryptochrome photolyase family 1 (550 aa)
           
  0.437
HemF_1
Coproporphyrinogen III oxidase (304 aa)
           
  0.404
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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