• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Phatr54067 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr54067" - Histone-like transcription factor in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr54067Histone-like transcription factor (130 aa)    
Predicted Functional Partners:
Phatr39335
Predicted protein (204 aa)
     
 
  0.994
Phatrdraft310
Transcriptional activator (83 aa)
     
 
  0.868
Phatr7801
Transcriptional activator (87 aa)
     
 
  0.868
Phatr46740
Transcriptional activator (338 aa)
     
 
  0.868
Phatr10199
Predicted protein (203 aa)
     
 
  0.834
Phatr49902
Predicted protein (593 aa)
     
   
  0.671
Phatr51026
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily (426 aa)
   
 
  0.649
Phatr49800
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily (426 aa)
   
 
  0.649
Phatr14374
Predicted protein (104 aa)
           
  0.617
Phatr45779
Predicted protein (343 aa)
     
 
  0.587
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
Server load: low (7%) [HD]