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STRINGSTRING
Phatr54068 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr54068" - N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr54068N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein (450 aa)    
Predicted Functional Partners:
Phatr34610
N-acetylglucosaminyl phosphatidylinositol deacetylase (267 aa)
   
 
  0.962
Phatr43101
Predicted protein (330 aa)
     
 
  0.933
Phatr43010
Predicted protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family (219 aa)
   
 
  0.848
Phatr30638
Predicted protein (294 aa)
   
   
  0.697
Phatr52551
Predicted protein (600 aa)
     
 
  0.671
Phatr18303
Mannosyl transferase (487 aa)
     
   
  0.636
Phatr44790
Mannosyltransferase (586 aa)
     
   
  0.625
Phatr49836
Predicted protein (667 aa)
     
   
  0.609
GWT1
Predicted protein (445 aa)
     
   
  0.605
DPM1
Dolichyl-phosphate mannosyltransferase (236 aa)
   
 
  0.600
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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