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Phatr54068 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr54068" - N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr54068N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein (450 aa)    
Predicted Functional Partners:
Phatr34610
N-acetylglucosaminyl phosphatidylinositol deacetylase (267 aa)
   
  0.969
Phatr43101
Predicted protein (330 aa)
         
    0.800
Phatr43010
Predicted protein (219 aa)
         
    0.800
Phatr19324
Predicted protein (554 aa)
       
  0.727
Phatr52551
Predicted protein (600 aa)
     
  0.659
DPM1
Dolichyl-phosphate mannosyltransferase (236 aa)
   
 
  0.623
PMM1
Phosphomannose mutase; Involved in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions (249 aa)
     
  0.583
Phatr47245
Predicted protein (480 aa)
   
 
  0.576
Phatr45980
Predicted protein (348 aa)
   
 
  0.576
Phatr45712
Predicted protein (480 aa)
   
 
  0.576
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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