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ME1 protein (Phaeodactylum tricornutum) - STRING interaction network
"ME1" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ME1Predicted protein; Malic enzyme (560 aa)    
Predicted Functional Partners:
MDH
Predicted protein; Belongs to the LDH/MDH superfamily (324 aa)
   
  0.978
Phatr30145
Citrate synthase; Belongs to the citrate synthase family (471 aa)
   
 
  0.971
PYC2
Precursor of carboxylase pyruvate carboxylase (1264 aa)
     
  0.960
PYC1
Precursor of carboxylase pyruvate carboxylase (1252 aa)
     
  0.960
Fum
Fumarate hydratase (462 aa)
 
 
  0.957
MS
Malate synthase; Belongs to the malate synthase family (553 aa)
   
 
  0.952
PK6
Pyruvate kinase; Belongs to the pyruvate kinase family (553 aa)
   
  0.947
PPdK
Predicted protein (1011 aa)
   
  0.943
FUM1
Precursor of fumarase fumarase (567 aa)
   
 
  0.943
PK3
Pyruvate kinase; Belongs to the pyruvate kinase family (543 aa)
   
  0.933
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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