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CK2_1 protein (Phaeodactylum tricornutum) - STRING interaction network
"CK2_1" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CK2_1Predicted protein; Belongs to the protein kinase superfamily (341 aa)    
Predicted Functional Partners:
Phatr4216
Predicted protein (350 aa)
         
 
0.800
Phatr14627
Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit (188 aa)
     
 
  0.761
Phatr12614
Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit (196 aa)
     
 
  0.761
CK2_2
Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit (204 aa)
     
 
  0.761
Phatr10531
Predicted protein (512 aa)
     
 
  0.665
Phatr11409
FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...] (160 aa)
     
 
  0.662
Phatr18239
Predicted protein (1058 aa)
     
 
  0.615
Phatrdraft224
Predicted protein (166 aa)
     
      0.597
RPN6
Regulatory proteasome non-atpase subunit 6 (405 aa)
     
 
  0.592
PHATR_1682
Anthranilate synthase. anthranilate synthetase. chorismate lyase (439 aa)
     
 
  0.581
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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