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HemA protein (Phaeodactylum tricornutum) - STRING interaction network
"HemA" - Glutamyl-tRNA reductase in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HemAGlutamyl-tRNA reductase (512 aa)    
Predicted Functional Partners:
Phatr36347
Predicted protein (411 aa)
 
 
  0.994
GluRS_2
Glutamyl-trna synthase (588 aa)
         
  0.967
GluRS_1
Glutamate-trna ligase (523 aa)
         
  0.967
Phatr54952
Predicted protein (415 aa)
       
 
  0.943
Phatr41746
Delta-aminolevulinic acid dehydratase (345 aa)
 
 
  0.873
hemC
Hydroxymethylbilane synthase (329 aa)
   
  0.863
PPO
Protoporphyrinogen oxidase (520 aa)
   
   
  0.776
Phatr12925
Predicted protein (255 aa)
 
 
 
  0.753
hemE
Uroporphyrinogen decarboxylase (366 aa)
   
   
  0.722
HemF_3
Coproporphyrinogen oxidase (292 aa)
   
   
  0.715
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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