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Phatr54164 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr54164" - Bacterial type voltage activated sodium channel in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr54164Bacterial type voltage activated sodium channel (415 aa)    
Predicted Functional Partners:
Phatr45020
Predicted protein (592 aa)
     
 
  0.535
CBP
Calcium binding protein (132 aa)
     
 
  0.441
Phatr49634
Predicted protein (621 aa)
     
 
  0.441
Phatr44009
Predicted protein (526 aa)
     
 
  0.441
CaM2
Calmodulin (154 aa)
     
 
  0.441
CaM1
Calmoduline (149 aa)
     
 
  0.441
Phatr21744
Predicted protein (149 aa)
     
 
  0.441
ATPse2-2B
P2B, P type ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family (1032 aa)
     
 
  0.420
Phatr47620
P2B, P type ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family (1118 aa)
     
 
  0.420
ATPase1-2B
P2B, P type ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family (1089 aa)
     
 
  0.420
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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