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STRINGSTRING
Phatr54169 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr54169" - Alpha glucosidase II in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr54169Alpha glucosidase II (802 aa)    
Predicted Functional Partners:
Phatr50836
Alpha subunit of glucosidase; Belongs to the glycosyl hydrolase 31 family (712 aa)
     
  0.998
Phatr27039
Predicted protein (634 aa)
           
  0.910
Phatr16786
Predicted protein (716 aa)
     
 
  0.869
Phatr54787
UDP-glucose-glycoprotein glucosyltransferase (166 aa)
     
   
  0.827
Phatr47099
Predicted protein (324 aa)
           
  0.671
Phatr41172
Calreticulin (390 aa)
     
 
  0.666
Phatr48534
Predicted protein (1026 aa)
           
  0.578
Phatr45163
Predicted protein (842 aa)
           
  0.575
Phatr9462
Predicted protein (160 aa)
           
  0.570
Phatr13820
Predicted protein (282 aa)
           
  0.504
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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