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STRINGSTRING
Phatr54229 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr54229" - Formin homology 2 containing protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr54229Formin homology 2 containing protein (2132 aa)    
Predicted Functional Partners:
Phatr47327
Predicted protein (786 aa)
     
 
  0.714
Phatr15613
Predicted protein; Belongs to the actin-binding proteins ADF family (123 aa)
     
 
  0.690
Phatr17954
Eukaryotic translation initiation factor 5A (158 aa)
       
 
  0.606
Phatr45580
Coronin like protein; Belongs to the WD repeat coronin family (450 aa)
     
 
  0.600
EB1
Predicted protein (256 aa)
     
 
  0.590
ACT1
Actin/actin like proteinPredicted protein; Belongs to the actin family (377 aa)
       
 
  0.564
ARP1
Actin related protein; Belongs to the actin family (391 aa)
       
 
  0.564
Phatr29812
Actin/actin like proteinPredicted protein; Belongs to the actin family (377 aa)
       
 
  0.564
Act2
Actin/actin like protein; Actin; Belongs to the actin family (377 aa)
       
 
  0.564
Pt-KIF3
Kinesin family-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family (953 aa)
     
 
  0.514
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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