• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Phatr5423 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr5423" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr5423Predicted protein (226 aa)    
Predicted Functional Partners:
Phatr12436
Predicted protein; Belongs to the adenylate kinase family (179 aa)
     
 
  0.904
Phatr12732
Predicted protein; Belongs to the adenylate kinase family (228 aa)
     
 
    0.900
ADK
Kinase adenylate kinase; Belongs to the adenylate kinase family (215 aa)
     
 
    0.900
Phatr37234
Predicted protein (281 aa)
         
    0.900
Phatr8828
Predicted protein (291 aa)
         
  0.863
Phatr33535
Predicted protein (357 aa)
         
  0.847
Phatr1840
Predicted protein (503 aa)
         
  0.822
Phatr47293
Predicted protein (580 aa)
   
   
  0.734
Phatr34896
Predicted protein (226 aa)
   
   
  0.734
Phatr38085
Predicted protein (619 aa)
         
  0.721
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
Server load: low (8%) [HD]