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BiP protein (Phaeodactylum tricornutum) - STRING interaction network
"BiP" - ER luminal binding protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BiPER luminal binding protein (659 aa)    
Predicted Functional Partners:
Phatr15032
GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner (157 aa)
   
  0.937
Phatr12188
GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner (100 aa)
   
  0.937
Phatr9321
Predicted protein (71 aa)
 
  0.919
Phatr15224
Predicted protein (131 aa)
 
  0.919
Phatr38015
Predicted protein (398 aa)
 
  0.917
Phatr13424
Predicted protein (385 aa)
 
  0.916
Phatr42151
Predicted protein (402 aa)
 
  0.915
HSP40A
Chaperone, dnaj-like protein (66 aa)
 
  0.914
Phatr18096
Predicted protein (353 aa)
 
  0.914
Phatr8521
Predicted protein (64 aa)
 
  0.912
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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