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STRINGSTRING
BiP protein (Phaeodactylum tricornutum) - STRING interaction network
"BiP" - ER luminal binding protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BiPER luminal binding protein; Belongs to the heat shock protein 70 family (659 aa)    
Predicted Functional Partners:
Phatr27039
Predicted protein (634 aa)
     
 
  0.909
Phatr16786
Predicted protein (716 aa)
     
 
  0.869
Phatr47062
Predicted protein (374 aa)
   
 
  0.855
Sec61alpha
Transport protein Sec61 alpha subunit; Belongs to the SecY/SEC61-alpha family (472 aa)
   
 
  0.842
HSP70G
Protein heat shock protein; Belongs to the heat shock protein 70 family (901 aa)
     
 
0.783
TPI/GapC3
Triosephosphate isomerase/glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family (614 aa)
   
 
  0.774
Phatr41172
Calreticulin (390 aa)
     
 
  0.757
Phatr47099
Predicted protein (324 aa)
     
 
  0.748
CPN60_2
Nuclear-encoded-like protein of chloroplast gro; Belongs to the chaperonin (HSP60) family (580 aa)
   
 
  0.725
CPN60_1
Mitochondria-targeted chaperonin; Belongs to the chaperonin (HSP60) family (579 aa)
   
 
  0.725
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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