• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Phatr54296 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr54296" - Mnd1 meiotic DNA recombination/cross-over promotion in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr54296Mnd1 meiotic DNA recombination/cross-over promotion; Required for proper homologous chromosome pairing and efficient cross-over and intragenic recombination during meiosis (206 aa)    
Predicted Functional Partners:
MSH4
Muts-like protein 4 (116 aa)
     
 
  0.912
MSH5
Muts-like protein 5 (376 aa)
     
   
  0.910
Phatr31781
Predicted protein (379 aa)
     
 
  0.878
Rad22
Predicted protein (468 aa)
           
  0.870
MRE11
Predicted protein (550 aa)
           
  0.863
Phatr19604
Predicted protein (363 aa)
     
   
  0.814
Phatr44595
Mitotic cohesin (663 aa)
     
   
  0.812
Phatr54612
Ercc4-like protein (736 aa)
     
   
  0.797
Mlh1
Mutl-like protein 1 (695 aa)
     
   
  0.797
Phatr36531
Type II DNA topoisomerase VI subunit (432 aa)
       
 
  0.794
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
Server load: low (7%) [HD]