STRINGSTRING
TFIIH-p44 protein (Phaeodactylum tricornutum) - STRING interaction network
"TFIIH-p44" - Suppressor of stem-loop protein 1 in Phaeodactylum tricornutum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TFIIH-p44Suppressor of stem-loop protein 1 (413 aa)    
Predicted Functional Partners:
Phatr44108
Predicted protein (358 aa)
     
  0.982
ERCC2
Xeroderma pigmentosum group D complementing protein (782 aa)
     
  0.981
Phatr36847
Predicted protein (111 aa)
       
  0.964
Phatr43960
Predicted protein (641 aa)
     
  0.916
MAT1
Predicted protein (294 aa)
     
  0.914
Phatr20574
Predicted protein (720 aa)
     
  0.912
Phatr3295
Predicted protein (156 aa)
     
  0.804
Phatr12118
Predicted protein (137 aa)
     
  0.804
CDKD1
Predicted protein (304 aa)
     
  0.804
Phatr24922
Predicted protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (111 aa)
     
  0.796
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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