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STRINGSTRING
GAPN protein (Phaeodactylum tricornutum) - STRING interaction network
"GAPN" - Glyceraldehyde-3-phosphate dehydrogenase in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAPNGlyceraldehyde-3-phosphate dehydrogenase (588 aa)    
Predicted Functional Partners:
TPI/GapC3
Triosephosphate isomerase/glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family (614 aa)
   
 
  0.929
Phatr17427
Predicted protein (695 aa)
   
 
  0.926
P5CS
Delta-1-pyrroline-5-carboxylate synthase; Delta l-pyrroline-5-carboxylate synthetase; In the C-terminal section; belongs to the gamma- glutamyl phosphate reductase family (747 aa)
   
   
  0.916
Phatr18027
Predicted protein (706 aa)
   
   
  0.916
Phatr22418
Catalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide (566 aa)
     
 
  0.869
MDH
Predicted protein; Belongs to the LDH/MDH superfamily (324 aa)
   
 
  0.822
Phatr49480
Predicted protein (486 aa)
     
 
  0.813
Phatr30145
Citrate synthase; Belongs to the citrate synthase family (471 aa)
   
   
  0.810
Phatr26176
Predicted protein (408 aa)
     
 
  0.805
Phatr34526
Predicted protein (440 aa)
   
   
  0.801
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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