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FRE4 protein (Phaeodactylum tricornutum) - STRING interaction network
"FRE4" - Ferric reductase in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FRE4Ferric reductase (746 aa)    
Predicted Functional Partners:
Phatr54983
Predicted protein; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria (891 aa)
           
  0.540
SOD2
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems (226 aa)
     
   
  0.523
SOD1
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems (216 aa)
     
   
  0.523
ANXA1
Annexin (333 aa)
       
 
  0.437
Phatr44109
Annexin (330 aa)
       
 
  0.437
Phatr15852
Predicted protein (138 aa)
       
 
  0.434
FRE3
Ferric reductase (422 aa)
           
  0.426
Phatr22418
Catalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide (566 aa)
           
  0.424
TYR1
Tyrosinase (546 aa)
           
  0.422
SMP1
Metalloprotease (1028 aa)
           
  0.422
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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