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ISIP2A protein (Phaeodactylum tricornutum) - STRING interaction network
"ISIP2A" - Iron starvation induced protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ISIP2AIron starvation induced protein (537 aa)    
Predicted Functional Partners:
ISIP3
Iron starvation induced protein (390 aa)
           
  0.424
ISIP1
Iron starvation induced protein (569 aa)
           
  0.424
ISIP2B
Iron starvation induced protein (327 aa)
           
  0.420
Phatr50577
Acetylornithine aminotransferase (476 aa)
           
  0.420
OAT
Ornithine aminotransferase (448 aa)
           
  0.420
Phatr55013
N-methyl transferase (398 aa)
           
  0.420
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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