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ACL protein (Phaeodactylum tricornutum) - STRING interaction network
"ACL" - Atp-citrate synthase in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACLAtp-citrate synthase; In the N-terminal section; belongs to the succinate/malate CoA ligase beta subunit family (1082 aa)    
Predicted Functional Partners:
Phatr30145
Citrate synthase; Belongs to the citrate synthase family (471 aa)
   
  0.993
PYC2
Precursor of carboxylase pyruvate carboxylase (1264 aa)
   
 
  0.962
PYC1
Precursor of carboxylase pyruvate carboxylase (1252 aa)
   
 
  0.962
ACC2
Biotin carboxylase (2282 aa)
     
 
  0.961
ACC1
Acetyl-coa carboxylase (2092 aa)
     
 
  0.961
MDH
Predicted protein; Belongs to the LDH/MDH superfamily (324 aa)
   
  0.961
Phatrdraft1828
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (477 aa)
   
  0.955
Phatr38009
Predicted protein (230 aa)
   
  0.955
DHLTA_3
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex; Dihydrolipoamide acetyl transferase (477 aa)
   
  0.955
DHLTA_1
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex; Dihydrolipoamide acetyltransferase (492 aa)
   
  0.955
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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