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STRINGSTRING
FRE1 protein (Phaeodactylum tricornutum) - STRING interaction network
"FRE1" - Ferric reductase 1 in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FRE1Ferric reductase 1 (1326 aa)    
Predicted Functional Partners:
Phatr54983
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria (891 aa)
           
  0.799
Phatr22418
Catalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide (566 aa)
           
  0.744
Phatr32902
Predicted protein (238 aa)
     
 
  0.690
ISIP1
Iron starvation induced protein (569 aa)
           
  0.558
ISIP3
Iron starvation induced protein (390 aa)
           
  0.558
Phatr15852
Predicted protein (138 aa)
       
 
  0.480
Phatr23658
Flavodoxin (207 aa)
           
  0.457
Phatr13706
Flavodoxin (176 aa)
           
  0.457
HSF2
DNA-binding heat shock factor (387 aa)
           
  0.456
HSF1
Heat shock factor, DNA-binding (428 aa)
           
  0.456
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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