• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Phatr54493 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr54493" - Udp-n-acetylglucosamine diphosphorylase in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr54493Udp-n-acetylglucosamine diphosphorylase (600 aa)    
Predicted Functional Partners:
UGP/PGM
UDP-Glucose-Pyrophosphorylase/Phosphoglucomutase (629 aa)
     
 
  0.938
PGM_1
Mutase phosphoglucomutase (600 aa)
     
 
  0.938
PGM_2
Phosphoglucomutase (528 aa)
   
  0.933
GALK1
Galactokinase (397 aa)
   
 
  0.927
GALE1
UDP-glucose 4-epimerase (358 aa)
   
 
  0.911
Phatr27190
Predicted protein (365 aa)
   
 
  0.911
SQD1
UDP-sulfoquinovose synthase, plastid (456 aa)
   
 
  0.911
Phatr11559
Nad-dependent epimerase/dehydratase (315 aa)
   
 
  0.911
UGDH1
UDP-glucose 6-dehydrogenase (475 aa)
     
 
  0.911
Phatr52603
Predicted protein (597 aa)
   
 
  0.695
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
Server load: low (12%) [HD]