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STRINGSTRING
Phatr54534 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr54534" - Tubulin alpha chain in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr54534Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain (451 aa)    
Predicted Functional Partners:
Phatr21122
Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain (447 aa)
     
0.996
EB1
Predicted protein (256 aa)
     
 
  0.993
DHC1
Predicted protein (4020 aa)
     
  0.967
Phatr43122
MAP65_ASE1 (620 aa)
     
 
  0.952
Phatr46838
Predicted protein (405 aa)
     
 
  0.937
Phatr5738
Predicted protein (247 aa)
     
 
  0.929
Spc97
Spc97 (1274 aa)
     
 
  0.897
Rab7
Predicted protein (237 aa)
     
 
  0.869
Phatr47936
Predicted protein (2798 aa)
     
 
  0.866
Pt-Spc98
Spindle pole body component; Spc98 (843 aa)
     
 
  0.850
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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