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PheRS protein (Phaeodactylum tricornutum) - STRING interaction network
"PheRS" - Phenylalanyl-trna synthetase class IIc family protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PheRSPhenylalanyl-trna synthetase class IIc family protein (405 aa)    
Predicted Functional Partners:
Phatr27709
Predicted protein (640 aa)
   
  0.994
Phatr25331
Predicted protein (505 aa)
   
0.993
Phatr8112
Predicted protein (88 aa)
   
  0.990
Phatr16545
Predicted protein (167 aa)
   
  0.990
Phatr13445
Predicted protein (164 aa)
   
  0.990
Phatr11830
Predicted protein (161 aa)
   
  0.990
Phatr10666
Predicted protein (102 aa)
   
  0.990
Phatr8926
Predicted protein (349 aa)
 
0.967
Phatr29824
Predicted protein (1177 aa)
   
 
  0.944
Phatr17198
Predicted protein (1052 aa)
   
 
  0.944
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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