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STRINGSTRING
Phatr54677 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr54677" - DNA polymerase in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr54677DNA polymerase (1087 aa)    
Predicted Functional Partners:
Phatr37723
Predicted protein (470 aa)
     
  0.999
Phatr52678
DNA polymerase (2155 aa)
     
  0.997
Phatr46806
Predicted protein (463 aa)
     
  0.994
Phatr50274
Predicted protein (574 aa)
     
  0.992
Phatr54992
DNA primase; Belongs to the eukaryotic-type primase small subunit family (458 aa)
     
  0.992
POLA
DNA polymerase (1147 aa)
     
0.983
PCNA
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (260 aa)
   
 
  0.979
Phatr19604
Predicted protein (363 aa)
     
 
  0.977
Phatr1690
Predicted protein (495 aa)
     
   
  0.960
MCM4
DNA helicase; Belongs to the MCM family (791 aa)
     
 
  0.959
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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