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STRINGSTRING
Phatr54703 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr54703" - Udp-n-acetylglucosamine pyrophosphorylase in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr54703Udp-n-acetylglucosamine pyrophosphorylase (472 aa)    
Predicted Functional Partners:
Phatr52603
Predicted protein (597 aa)
   
  0.968
GPI_3
Glucose-6-phosphate isomerase; Belongs to the GPI family (518 aa)
     
   
  0.584
GPI_1
Glucose-6-phosphate isomerase; Belongs to the GPI family (554 aa)
     
   
  0.584
GPI_2
Glucose-6-phosphate isomerase; Belongs to the GPI family (551 aa)
     
   
  0.584
BGS1
Glycosyl transferase, family 48 (635 aa)
           
  0.575
Phatr43611
Predicted protein (474 aa)
     
      0.566
Phatr14208
Predicted protein; Belongs to the sterol desaturase family (249 aa)
 
 
   
  0.531
TIM_1
Triosephosphate isomerase (268 aa)
     
   
  0.497
Phatr50738
Triosephosphate isomerase (290 aa)
     
   
  0.497
Phatr18228
Triosephosphate isomerase (298 aa)
     
   
  0.497
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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