• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
AP4beta protein (Phaeodactylum tricornutum) - STRING interaction network
"AP4beta" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AP4betaPredicted protein (805 aa)    
Predicted Functional Partners:
AP1alpha
AP-2 complex subunit alpha; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration (1019 aa)
     
 
  0.932
AP2mu
Predicted protein; Belongs to the adaptor complexes medium subunit family (425 aa)
     
 
  0.919
AP2sigma
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family (152 aa)
     
 
  0.870
Phatr16891
Predicted protein (450 aa)
     
 
  0.842
Phatr13511
Predicted protein (939 aa)
     
 
  0.842
AP1mu
Predicted protein; Belongs to the adaptor complexes medium subunit family (439 aa)
     
 
  0.811
AP4mu
Predicted protein; Belongs to the adaptor complexes medium subunit family (470 aa)
     
 
  0.811
CHC
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles (1702 aa)
     
 
  0.782
Phatr8741
Predicted protein (92 aa)
     
 
  0.706
AP4sigma
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family (157 aa)
     
 
  0.688
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
Server load: low (8%) [HD]