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APX1 protein (Phaeodactylum tricornutum) - STRING interaction network
"APX1" - Ascorbate peroxidase in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APX1Ascorbate peroxidase; Belongs to the peroxidase family (261 aa)    
Predicted Functional Partners:
Phatr22418
Catalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide (566 aa)
         
  0.836
Gsr_2
Glutathione reductase; Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family (496 aa)
   
   
  0.730
Phatr48636
Glutathione peroxidase; Belongs to the glutathione peroxidase family (177 aa)
     
   
  0.629
Phatr13005
Glutathione peroxidase; Belongs to the glutathione peroxidase family (157 aa)
     
   
  0.629
Phatr1690
Predicted protein (495 aa)
   
   
  0.545
Phatr47067
Predicted protein (1237 aa)
   
   
  0.523
CaM2
Calmodulin (154 aa)
           
  0.503
Phatr8717
Serine hydroxymethyltransferase; Interconversion of serine and glycine; Belongs to the SHMT family (464 aa)
   
   
  0.496
SHMT2
Serine hydroxymethyltransferase; Interconversion of serine and glycine; Belongs to the SHMT family (501 aa)
   
   
  0.496
SHMT
Serine hydroxymethyltransferase; Interconversion of serine and glycine; Belongs to the SHMT family (473 aa)
   
   
  0.496
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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