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STRINGSTRING
Phatr54958 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr54958" - Prohibitin-like protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr54958Prohibitin-like protein (284 aa)    
Predicted Functional Partners:
Phatr12799
Prohibitin-like protein (244 aa)
   
 
0.876
Phatr44478
Predicted protein (549 aa)
     
 
  0.682
Phatr45953
Predicted protein (857 aa)
     
 
  0.651
Phatr16786
Predicted protein (716 aa)
     
 
  0.647
TufA
Predicted protein; Elongation factor Tu (426 aa)
     
 
  0.606
Phatr12269
Predicted protein (300 aa)
     
   
  0.583
Phatr50480
Predicted protein (514 aa)
   
 
  0.538
Hsp70_1
Predicted protein; Belongs to the heat shock protein 70 family (673 aa)
   
 
  0.538
Phatr16182
Predicted protein; Belongs to the AAA ATPase family (514 aa)
     
 
  0.530
Phatr21030
V-type proton ATPase subunit; Subunit of the integral membrane V0 complex of vacuolar ATPase. Vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells, thus providing most of the energy required for transport processes in the vacuolar system (390 aa)
   
   
  0.502
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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