STRINGSTRING
Phatr54974 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr54974" - Hydrolase in Phaeodactylum tricornutum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr54974Hydrolase (494 aa)    
Predicted Functional Partners:
SKT1
Succinyl-coenzyme A-3-oxo-acid coenzyme a-transferase; Key enzyme for ketone body catabolism. Transfers the CoA moiety from succinate to acetoacetate. Formation of the enzyme-CoA intermediate proceeds via an unstable anhydride species formed between the carboxylate groups of the enzyme and substrate (511 aa)
       
  0.775
Phatr36165
Predicted protein (448 aa)
   
  0.655
Phatr41807
Predicted protein (407 aa)
     
  0.651
Phatr10378
Predicted protein (486 aa)
     
  0.651
Phatr9709
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis (71 aa)
     
 
  0.557
ACPZ
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis (127 aa)
     
 
  0.557
NRPS
Non ribosomal peptide synthase (1367 aa)
     
  0.530
MDH
Predicted protein (324 aa)
     
 
  0.512
Phatr31367
Predicted protein (819 aa)
   
   
  0.492
FAO1
Peroxisomal bifunctional enzyme (767 aa)
     
 
  0.477
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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