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Phatr54981 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr54981" - Ammonium transporter in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr54981Ammonium transporter (539 aa)    
Predicted Functional Partners:
Phatr54983
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria (891 aa)
     
   
  0.785
Phatr51092
Glutamine synthetase (416 aa)
   
   
  0.737
Phatr38509
Arginase; Belongs to the arginase family (301 aa)
           
  0.600
Phatr52619
Purine permease (593 aa)
     
   
  0.574
Phatr18945
Transport protein (562 aa)
           
  0.554
Phatr21116
Predicted protein; Argininosuccinate synthase (418 aa)
   
   
  0.529
GltX
Ferredoxin-dependent glutamate synthase, fusion of large and small subunits (1591 aa)
   
   
  0.526
GltD
Synthase of glutamate synthase (580 aa)
   
   
  0.523
Phatr30145
Citrate synthase; Belongs to the citrate synthase family (471 aa)
           
  0.500
ISIP2B
Iron starvation induced protein (327 aa)
           
  0.457
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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