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Phatr54983 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr54983" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr54983Predicted protein; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria (891 aa)    
Predicted Functional Partners:
Phatr12902
Predicted protein (536 aa)
   
 
  0.975
Phatr26029
Predicted protein (478 aa)
     
 
  0.956
Phatr2171
Predicted protein (439 aa)
     
 
  0.948
Phatr48112
Predicted protein (387 aa)
   
  0.885
Phatr15423
Predicted protein (367 aa)
   
  0.885
GltD
Synthase of glutamate synthase (580 aa)
   
 
  0.881
Phatr43018
Predicted protein (509 aa)
   
 
  0.855
Phatr51092
Glutamine synthetase (416 aa)
         
  0.806
CPS-II
Predicted protein (1542 aa)
   
   
  0.799
SDH1
Succinate dehydrogenase flavoprotein; Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q) (638 aa)
   
  0.798
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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