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ISIP1 protein (Phaeodactylum tricornutum) - STRING interaction network
"ISIP1" - Iron starvation induced protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ISIP1Iron starvation induced protein (569 aa)    
Predicted Functional Partners:
ISIP3
Iron starvation induced protein (390 aa)
           
  0.510
FRE1
Ferric reductase 1 (1326 aa)
           
  0.480
FRE2
Ferric reductase 2 (656 aa)
           
  0.430
PetJ
Cytochrome c6, cytochrome c553 (133 aa)
           
  0.426
ISIP2A
Iron starvation induced protein (537 aa)
           
  0.424
Phatr16343
Ferritin; Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation (165 aa)
           
  0.424
Phatr23658
Flavodoxin (207 aa)
           
  0.422
Phatr13706
Flavodoxin (176 aa)
           
  0.422
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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