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ISIP1 protein (Phaeodactylum tricornutum) - STRING interaction network
"ISIP1" - Iron starvation induced protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ISIP1Iron starvation induced protein (569 aa)    
Predicted Functional Partners:
FRE1
Ferric reductase 1 (1326 aa)
           
  0.558
ISIP3
Iron starvation induced protein (390 aa)
           
  0.558
FRE2
Ferric reductase 2 (656 aa)
           
  0.558
Fba3
Cytosolic class II aldolase (400 aa)
           
  0.556
Phatr23658
Flavodoxin (207 aa)
           
  0.554
Phatr13706
Flavodoxin (176 aa)
           
  0.554
HSF2
DNA-binding heat shock factor (387 aa)
           
  0.455
HSF1
Heat shock factor, DNA-binding (428 aa)
           
  0.455
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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