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SKP3 protein (Phaeodactylum tricornutum) - STRING interaction network
"SKP3" - Sensor kinase protein 3 in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKP3Sensor kinase protein 3 (1017 aa)    
Predicted Functional Partners:
CPF2
Cry-dash from the cryptochrome/photolyase family (610 aa)
       
 
  0.624
HY2
Predicted protein (342 aa)
           
  0.571
PAS
Uncharacterized protein PAS (142 aa)
           
  0.536
Phatr1840
Predicted protein (503 aa)
         
  0.498
Phatr31781
Predicted protein (379 aa)
           
  0.477
Dph1
Diatom PHytochrome 1 (1010 aa)
     
 
0.459
OEE3
Oxygen-evolving enhancer protein 3 (200 aa)
           
  0.457
GLRXC2
Glutaredoxin (200 aa)
           
  0.457
Phatr48636
Glutathione peroxidase; Belongs to the glutathione peroxidase family (177 aa)
     
   
  0.456
Phatr13005
Glutathione peroxidase; Belongs to the glutathione peroxidase family (157 aa)
     
   
  0.456
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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