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Phatr55040 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr55040" - D-lactate dehydrogenase in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr55040D-lactate dehydrogenase (506 aa)    
Predicted Functional Partners:
PPdK
Predicted protein (1011 aa)
       
  0.921
GLO_2
Glyoxalase (262 aa)
     
 
  0.912
PYC2
Precursor of carboxylase pyruvate carboxylase (1264 aa)
     
 
  0.908
PYC1
Precursor of carboxylase pyruvate carboxylase (1252 aa)
     
 
  0.908
ME1
Predicted protein; Malic enzyme (560 aa)
       
  0.908
Phatr51970
Malic enzyme (555 aa)
       
  0.908
PDHB1
Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2 (360 aa)
     
 
  0.906
PK6
Pyruvate kinase; Belongs to the pyruvate kinase family (553 aa)
     
  0.905
PK3
Pyruvate kinase; Belongs to the pyruvate kinase family (543 aa)
     
  0.905
PK2
Pyruvate kinase; Belongs to the pyruvate kinase family (513 aa)
     
  0.905
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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