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STRINGSTRING
PHATR_5508 protein (Phaeodactylum tricornutum) - STRING interaction network
"PHATR_5508" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHATR_5508Predicted protein (142 aa)    
Predicted Functional Partners:
Phatr14572
Predicted protein (219 aa)
           
  0.799
Phatr50120
Predicted protein (167 aa)
           
  0.638
Phatr48547
Predicted protein (728 aa)
     
      0.594
Phatr44287
Predicted protein (364 aa)
     
   
  0.574
Phatr41615
Predicted protein (386 aa)
     
   
  0.574
Phatr37569
Predicted protein (298 aa)
     
   
  0.574
Phatr51058
Predicted protein (255 aa)
 
            0.567
Phatr44793
Predicted protein (373 aa)
       
 
  0.418
Phatr41150
Predicted protein (347 aa)
       
 
  0.418
Phatr40967
Predicted protein (458 aa)
       
 
  0.418
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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