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P5CS protein (Phaeodactylum tricornutum) - STRING interaction network
"P5CS" - Delta l-pyrroline-5-carboxylate synthetase in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
P5CSDelta l-pyrroline-5-carboxylate synthetase (747 aa)    
Predicted Functional Partners:
Phatr18027
Predicted protein (706 aa)
 
 
0.985
OAT
Ornithine aminotransferase (448 aa)
   
  0.983
GltX
Ferredoxin-dependent glutamate synthase, fusion of large and small subunits (1591 aa)
     
 
  0.956
Phatr31906
Aldehyde dehydrogenase (551 aa)
       
  0.953
Phatr13951
Predicted protein (450 aa)
       
  0.946
Phatr51092
Glutamine synthetase (416 aa)
       
  0.887
Phatr16375
Pyrroline-5-carboxylate reductase (266 aa)
 
   
  0.885
Phatr25379
Pyrroline-5-carboxylate reductase (289 aa)
 
   
  0.882
GltD
Synthase of glutamate synthase (580 aa)
       
  0.874
Phatr45239
Predicted protein (1097 aa)
         
    0.857
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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