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STRINGSTRING
P5CS protein (Phaeodactylum tricornutum) - STRING interaction network
"P5CS" - Delta-1-pyrroline-5-carboxylate synthase in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
P5CSDelta-1-pyrroline-5-carboxylate synthase; Delta l-pyrroline-5-carboxylate synthetase; In the C-terminal section; belongs to the gamma- glutamyl phosphate reductase family (747 aa)    
Predicted Functional Partners:
OAT
Ornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family (448 aa)
   
  0.995
Phatr31906
Aldehyde dehydrogenase (551 aa)
   
 
  0.985
Phatr51092
Glutamine synthetase (416 aa)
   
 
  0.968
Phatr25379
Pyrroline-5-carboxylate reductase; Belongs to the pyrroline-5-carboxylate reductase family (289 aa)
 
   
  0.968
Phatr16375
Pyrroline-5-carboxylate reductase (266 aa)
 
   
  0.966
Phatr18027
Predicted protein (706 aa)
 
 
0.961
Phatr44984
Predicted protein (552 aa)
   
 
  0.959
Phatr41702
Predicted protein (671 aa)
   
   
  0.947
Phatr1690
Predicted protein (495 aa)
         
  0.942
Phatr34526
Predicted protein (440 aa)
   
   
  0.942
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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