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Phatr55197 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr55197" - Oligosaccharyl transferase in Phaeodactylum tricornutum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr55197Oligosaccharyl transferase (911 aa)    
Predicted Functional Partners:
Sec61alpha
Transport protein Sec61 alpha subunit (472 aa)
     
 
  0.802
Phatr55198
STT3 subunit-like protein (894 aa)
         
 
0.800
Phatr41172
Calreticulin (390 aa)
     
   
  0.724
DPM1
Dolichyl-phosphate mannosyltransferase (236 aa)
   
 
  0.715
Phatr54844
Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (413 aa)
           
  0.661
Phatr10976
Mannosyltransferase (370 aa)
       
 
  0.594
Phatr44425
Alpha-mannosyltransferase (581 aa)
       
 
  0.591
Phatr54787
UDP-glucose-glycoprotein glucosyltransferase (166 aa)
     
 
  0.588
Phatr46140
Galactosyl transferase (361 aa)
           
  0.510
Phatr47245
Predicted protein (480 aa)
   
 
  0.505
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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