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Phatr55198 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr55198" - STT3 subunit-like protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr55198STT3 subunit-like protein (894 aa)    
Predicted Functional Partners:
Sec61alpha
Transport protein Sec61 alpha subunit (472 aa)
     
 
  0.802
Phatr55197
Oligosaccharyl transferase (911 aa)
         
 
0.800
Phatr10976
Mannosyltransferase (370 aa)
       
 
  0.594
Phatr44425
Alpha-mannosyltransferase (581 aa)
       
 
  0.591
Phatr54787
UDP-glucose-glycoprotein glucosyltransferase (166 aa)
     
 
  0.588
Phatr47245
Predicted protein (480 aa)
   
 
  0.505
Phatr45980
Predicted protein (348 aa)
   
 
  0.505
Phatr45712
Predicted protein (480 aa)
   
 
  0.505
Phatr34317
Dolichol phosphate glucosyltransferase (320 aa)
   
 
  0.505
Phatr9724
Predicted protein (371 aa)
   
   
  0.504
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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