• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
hCDK6 protein (Phaeodactylum tricornutum) - STRING interaction network
"hCDK6" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hCDK6Predicted protein; Belongs to the protein kinase superfamily (258 aa)    
Predicted Functional Partners:
Phatr21660
Serine/threonine-protein kinase TOR (2400 aa)
     
  0.969
Phatr50253
Cysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy (557 aa)
     
 
  0.914
Phatr36142
Predicted protein (320 aa)
 
   
  0.887
Phatr18549
Predicted protein (1250 aa)
     
  0.884
Phatr50303
Autophagy-related protein; Belongs to the ATG8 family (124 aa)
     
 
  0.857
Phatr41667
Autophagy-related protein 3 (302 aa)
     
 
  0.842
Phatr36572
Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle (955 aa)
     
 
  0.838
Phatr9342
Predicted protein (382 aa)
 
 
 
  0.829
Phatr43913
Autophagy protein 5; Involved in autophagic vesicle formation (330 aa)
     
 
  0.825
Phatr44229
Predicted protein (818 aa)
     
 
  0.808
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
Server load: low (9%) [HD]