Groups of genes that are frequently observed in each other's genomic neighborhood.
STRING allows inspection of the interaction evidence for any given network. Choose any of the viewers above (disabled if not applicable in your network).
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
colored nodes: query proteins and first shell of interactors
white nodes: second shell of interactors
empty nodes: proteins of unknown 3D structure
filled nodes: some 3D structure is known or predicted
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
from curated databases
Predicted protein; Belongs to the protein kinase superfamily (258 aa)
Predicted Functional Partners:
Serine/threonine-protein kinase TOR (2400 aa)
Cysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy (557 aa)
Predicted protein (320 aa)
Predicted protein (1250 aa)
Autophagy-related protein; Belongs to the ATG8 family (124 aa)
Autophagy-related protein 3 (302 aa)
Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle (955 aa)
Predicted protein (382 aa)
Autophagy protein 5; Involved in autophagic vesicle formation (330 aa)
Predicted protein (818 aa)
Your Current Organism:
NCBI taxonomy Id: 2850 Other names: P. tricornutum, Phaeodactylum tricornutum