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PGAM_3 protein (Phaeodactylum tricornutum) - STRING interaction network
"PGAM_3" - Phosphoglycerate mutase in Phaeodactylum tricornutum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGAM_3Phosphoglycerate mutase (228 aa)    
Predicted Functional Partners:
PGK
Phosphoglycerate kinase (448 aa)
     
  0.987
Phatr29157
Phosphoglycerate kinase (441 aa)
     
  0.987
TPI/GapC3
Triosephosphate isomerase/glyceraldehyde-3-phosphate dehydrogenase (614 aa)
   
  0.985
Phatrdraft1572
Enolase (464 aa)
   
  0.984
Phatr41515
Enolase (437 aa)
   
  0.984
TIM_1
Triosephosphate isomerase (268 aa)
   
  0.977
GPI_2
Glucose-6-phosphate isomerase (551 aa)
   
 
  0.936
FbaC1
Fructose-bisphosphate aldolase (402 aa)
     
  0.923
Fba3
Cytosolic class II aldolase (400 aa)
     
  0.923
FbaC2
Fructose-1,6-bisphosphate aldolase (439 aa)
     
  0.923
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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