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STRINGSTRING
Phatr5738 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr5738" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr5738Predicted protein (247 aa)    
Predicted Functional Partners:
Phatr46823
Predicted protein (1265 aa)
     
 
  0.934
Phatr54534
Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain (451 aa)
     
 
  0.929
ARL2
Predicted protein; Belongs to the small GTPase superfamily. Arf family (187 aa)
     
   
  0.919
Phatr21122
Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain (447 aa)
     
 
  0.854
Phatr42757
Predicted protein (208 aa)
     
 
  0.727
hNpl4
Predicted protein (473 aa)
     
   
  0.657
Phatr16814
Predicted protein (662 aa)
           
  0.629
APC6
Predicted protein (381 aa)
     
   
  0.618
Phatr31068
Predicted protein (353 aa)
     
   
  0.592
Rab7
Predicted protein (237 aa)
           
  0.535
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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