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STRINGSTRING
Phatr5762 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr5762" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr5762Predicted protein (236 aa)    
Predicted Functional Partners:
Phatr16987
Predicted protein; Belongs to the DEAD box helicase family (404 aa)
   
 
  0.994
Phatr46543
Predicted protein (532 aa)
     
 
  0.993
Phatr46257
Predicted protein (238 aa)
     
 
  0.992
Phatr19831
ATP-dependent (S)-NAD(P)H-hydrate dehydratase; Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ATP, which is converted to ADP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration; Belongs to the NnrD/CARKD family (310 aa)
 
   
  0.966
Phatr45848
Predicted protein (276 aa)
     
 
  0.929
Phatr50048
Predicted protein (225 aa)
       
 
  0.929
Phatr7848
Predicted protein (135 aa)
     
 
  0.915
Phatr23748
Predicted protein (67 aa)
     
 
  0.904
Phatr43922
Predicted protein (973 aa)
     
 
  0.890
Phatr10494
Predicted protein (98 aa)
     
 
  0.851
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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