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STRINGSTRING
Phatr5857 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr5857" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr5857Predicted protein (186 aa)    
Predicted Functional Partners:
TPI/GapC3
Triosephosphate isomerase/glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family (614 aa)
   
 
  0.933
FbaC5
Fructose-bisphosphate aldolase (358 aa)
     
   
  0.698
UGP/PGM
UDP-Glucose-Pyrophosphorylase/Phosphoglucomutase (629 aa)
   
 
  0.686
PGM_1
Mutase phosphoglucomutase (600 aa)
   
 
  0.686
MDH
Predicted protein; Belongs to the LDH/MDH superfamily (324 aa)
   
   
  0.656
PMI1
Mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 1 family (351 aa)
   
   
  0.649
Phatr17427
Predicted protein (695 aa)
   
 
  0.627
Phatr13382
Predicted protein (244 aa)
   
   
  0.606
Phatr1690
Predicted protein (495 aa)
         
  0.600
PEPCK1
Phosphoenolpyruvate carboxykinase (612 aa)
   
   
  0.599
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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