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STRINGSTRING
PHATR_5873 protein (Phaeodactylum tricornutum) - STRING interaction network
"PHATR_5873" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHATR_5873Predicted protein (186 aa)    
Predicted Functional Partners:
Phatr22797
ER membrane protein complex subunit 3; Belongs to the EMC3 family (288 aa)
     
 
  0.995
Phatr12729
Predicted protein (97 aa)
     
 
  0.980
Phatr43900
Predicted protein (882 aa)
     
 
  0.980
Phatrdraft289
Predicted protein (144 aa)
     
 
  0.734
Phatr35508
Predicted protein (320 aa)
       
 
  0.706
Phatr36899
Predicted protein (156 aa)
           
  0.568
DPM1
Dolichyl-phosphate mannosyltransferase (236 aa)
     
   
  0.454
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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