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ZEP2 protein (Phaeodactylum tricornutum) - STRING interaction network
"ZEP2" - Precursor of protein zeaxanthin epoxidase-like protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZEP2Precursor of protein zeaxanthin epoxidase-like protein (192 aa)    
Predicted Functional Partners:
VDE
Violaxanthin deepoxidase (262 aa)
         
  0.889
ZEP3
Zeaxanthin epoxidase (391 aa)
   
   
0.825
ZEP1
Zeaxanthin epoxidase (565 aa)
   
   
0.825
LCYB
Precursor of cyclase lycopene beta cyclase (261 aa)
     
   
  0.704
VDL1
Precursor of protein violaxanthin deepoxidase-like protein (408 aa)
           
  0.564
Phatr38600
Predicted protein (703 aa)
           
  0.556
ZDS
Zeta-carotene desaturase (495 aa)
     
   
  0.547
VDL2
Precursor of protein violaxanthin deepoxidase-like protein (555 aa)
           
  0.502
PSY
Phytoene synthase (309 aa)
   
   
  0.473
CPF2
Cry-dash from the cryptochrome/photolyase family (610 aa)
     
   
  0.461
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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