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STRINGSTRING
Phatr6093 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr6093" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr6093Predicted protein (144 aa)    
Predicted Functional Partners:
H2A-m1
Histone H2A (138 aa)
     
 
  0.803
Phatr9860
Predicted protein (318 aa)
     
 
  0.706
Phatr45764
Predicted protein (1603 aa)
     
 
  0.649
Phatr45703
Predicted protein (2426 aa)
     
 
  0.649
Phatr41746
Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family (345 aa)
           
  0.615
POLA
DNA polymerase (1147 aa)
     
 
  0.558
Phatr21543
Predicted protein (366 aa)
       
 
  0.533
Phatr45934
Predicted protein (627 aa)
     
 
  0.517
Phatr4016
Predicted protein (248 aa)
     
 
  0.517
Phatr12368
Predicted protein (126 aa)
     
 
  0.517
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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