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Phatr6151 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr6151" - Proteasome subunit beta type in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurence
Coexpression
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[Homology]
Score
Phatr6151Proteasome subunit beta type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family (187 aa)    
Predicted Functional Partners:
Phatrdraft866
Proteasome subunit beta; Belongs to the peptidase T1B family (248 aa)
     
 
  0.961
Phatr53939
Proteasome endopeptidase complex; Proteasome alpha 1 subunit; Belongs to the peptidase T1A family (245 aa)
     
 
  0.959
Phatr24474
Proteasome subunit alpha type (264 aa)
     
 
  0.956
Phatr5685
Proteasome subunit alpha type (258 aa)
     
 
  0.956
Phatr28202
Proteasome subunit alpha type (245 aa)
     
 
  0.954
Phatr45122
Predicted protein; Belongs to the AAA ATPase family (421 aa)
     
 
  0.944
Phatr19341
Predicted protein (199 aa)
   
 
  0.939
RPN10
Regulatory proteasome non-atpase subunit 10 (231 aa)
     
 
  0.938
Phatr11735
Predicted protein; Belongs to the AAA ATPase family (389 aa)
     
 
  0.936
Phatr9090
Predicted protein; Belongs to the AAA ATPase family (431 aa)
     
 
  0.934
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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