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STRINGSTRING
Phatr6258 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr6258" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr6258Predicted protein (205 aa)    
Predicted Functional Partners:
Phatr13820
Predicted protein (282 aa)
     
 
  0.999
Phatr42570
Predicted protein (1267 aa)
     
 
  0.998
Phatr9929
Predicted protein (196 aa)
     
 
  0.998
Phatr37596
Predicted protein (531 aa)
     
 
  0.998
Phatr30019
Predicted protein (299 aa)
     
 
  0.998
Phatr51897
Predicted protein (531 aa)
     
   
  0.995
Phatr31725
Predicted protein (629 aa)
     
 
  0.995
Phatr15354
Predicted protein (300 aa)
     
   
  0.993
Phatr32646
Predicted protein (268 aa)
     
 
  0.993
Phatr46516
RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)- acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires a tRNA-binding adapter protein for full tRNA acetyltransferase activity but not for 18S rRNA acetylation (1051 aa)
     
 
  0.991
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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