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MER3 protein (Phaeodactylum tricornutum) - STRING interaction network
"MER3" - Mer3 meiotic cross-over helicase in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MER3Mer3 meiotic cross-over helicase (154 aa)    
Predicted Functional Partners:
MSH4
Muts-like protein 4 (116 aa)
     
 
  0.898
MSH5
Muts-like protein 5 (376 aa)
     
 
  0.893
Phatr27039
Predicted protein (634 aa)
 
 
   
  0.857
Phatr54612
Ercc4-like protein (736 aa)
         
  0.767
Phatr19982
Predicted protein (2347 aa)
     
 
  0.756
Mlh1
Mutl-like protein 1 (695 aa)
   
 
  0.707
Phatr2097
Predicted protein; Belongs to the DEAD box helicase family (552 aa)
     
 
  0.697
Phatr54296
Mnd1 meiotic DNA recombination/cross-over promotion; Required for proper homologous chromosome pairing and efficient cross-over and intragenic recombination during meiosis (206 aa)
           
  0.670
Phatr9893
Predicted protein; Belongs to the DEAD box helicase family (455 aa)
     
 
  0.669
Phatr13779
Predicted protein; Belongs to the AAA ATPase family (304 aa)
           
  0.640
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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