STRINGSTRING
Phatr6387 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr6387" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr6387Predicted protein (135 aa)    
Predicted Functional Partners:
ATPase2-3A
P3A, P type ATPase (969 aa)
   
  0.863
Phatr54805
Atpase2-p5 (1181 aa)
   
  0.863
ATPase1-P5
P5, P type ATPase (1138 aa)
   
  0.863
Phatr53964
Probable calcium ATPase (1006 aa)
   
  0.863
Phatr23629
Predicted protein (982 aa)
   
  0.863
Phatr228
Probable serca-type calcium ATPase (1028 aa)
   
  0.863
ATPase-3A
P3A, P type ATPase (809 aa)
   
  0.863
Phatr9309
Predicted protein (284 aa)
       
 
  0.645
Phatr23646
Predicted protein (648 aa)
       
 
  0.645
Phatr17504
Predicted protein (673 aa)
       
 
  0.645
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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